BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D06SP1|AL427003
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1667 1782 0.0
>3x_Contig1667
Length = 12071
Score = 1782 bits (892), Expect = 0.0
Identities = 919/934 (98%), Gaps = 1/934 (0%)
Strand = Plus / Plus
Query: 1 gatcttaactatanttgcctatgaaggtgtttttgtctctgccaacaaaacaccatacaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gatcttaactata-ttgcctatgaaggtgtttttgtctctgccaacaaaacaccatacaa 832
Query: 61 tttagcgtgtttgttgaacttcagctgaatgatatctcataatattgaattgatctcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tttagcgtgtttgttgaacttcagctgaatgatatctcataatattgaattgatctcggg 892
Query: 121 aggataaacgacgggaaagggagcagtttcaagtcacgtgtcagtatccgggtatcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 aggataaacgacgggaaagggagcagtttcaagtcacgtgtcagtatccgggtatcattt 952
Query: 181 tttagtgcttctaggcttaagttgcttcagttaaggcactcaaatgtgagcgtgcagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 tttagtgcttctaggcttaagttgcttcagttaaggcactcaaatgtgagcgtgcagcct 1012
Query: 241 tgagaaagcttcgaaggtcatcggtagctgctaaattgtttagtaagtcattctttataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 tgagaaagcttcgaaggtcatcggtagctgctaaattgtttagtaagtcattctttataa 1072
Query: 301 tctgaggcaatttaggattcgaatctgtaattttatmagtatcttgagacacatcaagag 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1073 tctgaggcaatttaggattcgaatctgtaattttataagtatcttgagacacatcaagag 1132
Query: 361 taatcgacaattgtggactgacgtcaacggtccttgaagtgaaatggaacgtaatggcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 taatcgacaattgtggactgacgtcaacggtccttgaagtgaaatggaacgtaatggcat 1192
Query: 421 cctgagcatttgcagatatatgamgaccaagtagtgtctcaaatmatgctacttcattcg 480
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1193 cctgagcatttgcagatatatgaagaccaagtagtgtctcaaataatgctacttcattcg 1252
Query: 481 tatctttmctgctttgtmacaatcgcgattgtctctctctctcgagatctttagtctgtt 540
||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1253 tatctttactgctttgtaacaatcgcgattgtttctctctctcgagatctttagtctgtt 1312
Query: 541 cctttagcaagayatctagtttatcaagttctttatgtcamacctctcgttcaccgataa 600
|||||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 1313 cctttagcaagatatctagtttatcaagttctttatgtaaaaactctcgttcaccgataa 1372
Query: 601 gtttatctcgttttgttagamaggctttactttgcgcattcacttcacttacttcacgtt 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 gtttatctcgttttgttagaaaggctttactttgcgcattcacttcacttacttcacgtt 1432
Query: 661 gtgatgattcamattctgtaaaagttcaaattgacgtttgtyagtattacgaaatcttca 720
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1433 gtgatgattcaaattctgtaaaagttcaaattgacgtttgttagtattacgaaatcttca 1492
Query: 721 aggcggtgcaattccctggttacaattttcagtacattgtggaacttaaacataccttct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 aggcggtgcaattccctggttacaattttcagtacattgtggaacttaaacataccttct 1552
Query: 781 tctagggaaatttggtgttcttccagttgtcgtagtttatcctttagtgcctcaatcttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 tctagggaaatttggtgttcttccagttgtcgtagtttatcctttagtgcctcaatcttc 1612
Query: 841 tttatcttttccgattcactattccagtacgtttcactcttcgtagctagatcttggtta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 tttatcttttccgattcactattccagtacgtttcactcttcgtagctagatcttggtta 1672
Query: 901 ttcttaattaaaaattgatggrtcttcgattgga 934
||||||||||||||||||||| ||||||||||||
Sbjct: 1673 ttcttaattaaaaattgatggatcttcgattgga 1706
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5942
Number of Sequences: 1807
Number of extensions: 5942
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)